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Finding Characteristic Patterns Embedded in Non-transcribed Region of Dictyostelium Discoideum by Computed Moire
http://hdl.handle.net/10458/338
http://hdl.handle.net/10458/33872b93251-09c8-4f00-8456-47c26844557d
| 名前 / ファイル | ライセンス | アクション |
|---|---|---|
KJ00002428259.pdf (515.2 kB)
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| Item type | 紀要論文 / Departmental Bulletin Paper(1) | |||||||||||
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| 公開日 | 2007-06-28 | |||||||||||
| タイトル | ||||||||||||
| タイトル | Finding Characteristic Patterns Embedded in Non-transcribed Region of Dictyostelium Discoideum by Computed Moire | |||||||||||
| 言語 | en | |||||||||||
| 言語 | ||||||||||||
| 言語 | eng | |||||||||||
| キーワード | ||||||||||||
| 言語 | en | |||||||||||
| 主題Scheme | Other | |||||||||||
| 主題 | Matching, Dictyostelium Discoideum, Vegetative Stage, Morphogenesis Stage | |||||||||||
| 資源タイプ | ||||||||||||
| 資源タイプ識別子 | http://purl.org/coar/resource_type/c_6501 | |||||||||||
| 資源タイプ | departmental bulletin paper | |||||||||||
| その他（別言語等）のタイトル | ||||||||||||
| その他のタイトル | Finding Characteristic Patterns Embedded in Non-transcribed Region of Dictyostelium Discoideum by Computed Moire | |||||||||||
| 言語 | en | |||||||||||
| 著者 |
Onitani, Toshiro
× Onitani, Toshiro× Yoshihara, Ikuo× 山森, 一人
WEKO
11805
× Yasunaga, Moritoshi |
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| 抄録 | ||||||||||||
| 内容記述タイプ | Abstract | |||||||||||
| 内容記述 | Abstract Finding transcription regulatory pattern of Dictyostelium discoideum (D. discoideum) is one of the most important tasks in genomics. Life cycle of D. discoideum is divided into vegetative stage and morphogenesis stage. The goal of this paper is to develop the technique for extracting the feature patterns in vegetative stage and morphogenesis stage. We calculate each score for candidate patterns ("aaaaaaaa"-"tttttttt") by matching these candidate patterns to DNA sequence of D. discoideum. The feature patterns of vegetative stage and morphogenesis stage are extracted by comparing scores of morphogenesis stage with those of vegetative stage. Experiments reveal that "cagcagca", "agcagcac", "gagagaga", "cagcatca", and "caccagca" appear in vegetative stage more than morphogenesis stage, and "cacaccc", "gtgtgtgt","acgactac","acacaccc",and "ctactact" appear in morphogenesis stage more than vegetative stage. |
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| 言語 | en | |||||||||||
| 書誌情報 |
ja : 宮崎大学工学部紀要 en : Memoirs of Faculty of Engineering, University of Miyazaki 巻 33, p. 301-306, 発行日 2004-10 |
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| 出版者 | ||||||||||||
| 出版者 | 宮崎大学工学部 | |||||||||||
| 言語 | ja | |||||||||||
| 出版者 | ||||||||||||
| 出版者 | Faculty of Engineering, University of Miyazaki | |||||||||||
| 言語 | en | |||||||||||
| ISSN | ||||||||||||
| 収録物識別子タイプ | ISSN | |||||||||||
| 収録物識別子 | 05404924 | |||||||||||
| 書誌レコードID | ||||||||||||
| 収録物識別子タイプ | NCID | |||||||||||
| 収録物識別子 | AA00732558 | |||||||||||
| 著者版フラグ | ||||||||||||
| 出版タイプ | VoR | |||||||||||
| 出版タイプResource | http://purl.org/coar/version/c_970fb48d4fbd8a85 | |||||||||||
