{"created":"2024-09-05T06:34:27.841599+00:00","id":2000731,"links":{},"metadata":{"_buckets":{"deposit":"c66bab80-5e31-45a5-8922-75b05db1d2bf"},"_deposit":{"created_by":9,"id":"2000731","owner":"9","owners":[9],"pid":{"revision_id":0,"type":"depid","value":"2000731"},"status":"published"},"_oai":{"id":"oai:miyazaki-u.repo.nii.ac.jp:02000731","sets":["76","76:64"]},"author_link":["3231"],"item_10001_biblio_info_7":{"attribute_name":"書誌情報","attribute_value_mlt":[{"bibliographicIssueDates":{"bibliographicIssueDate":"2023-11-27","bibliographicIssueDateType":"Issued"},"bibliographicPageStart":"20220446","bibliographicVolumeNumber":"379","bibliographic_titles":[{"bibliographic_title":"Philosophical Transactions of the Royal Society B: Biological Sciences","bibliographic_titleLang":"en"}]}]},"item_10001_description_5":{"attribute_name":"抄録","attribute_value_mlt":[{"subitem_description":"The Strongyloides clade, to which the parasitic nematode genus Strongyloides belongs, contains taxa with diverse lifestyles, ranging from free-living to obligate vertebrate parasites. Reproductive strategies are also diverse in this group of nematodes, employing not only sexual reproduction but also parthenogenesis, making it an attractive group to study genome adaptation to specific conditions. An in-depth understanding of genome evolution, however, has been hampered by fragmented genome assemblies. In this study, we generated chromosome-level genome assemblies for two Strongyloides species and the outgroup species Rhabditophanes diutinus using long-read sequencing and high‐throughput chromosome conformation capture (Hi-C). Our synteny analyses revealed a clearer picture of chromosome evolution in this group, suggesting that a functional sex chromosome has been maintained throughout the group. We further investigated sex chromosome dynamics in the lifecycle of Strongyloides ratti and found that bivalent formation in oocytes appears to be important for male production in the mitotic parthenogenesis.\n\nThis article is part of the Theo Murphy meeting issue ‘Strongyloides: omics to worm-free populations’.","subitem_description_language":"en","subitem_description_type":"Abstract"}]},"item_10001_description_6":{"attribute_name":"内容記述","attribute_value_mlt":[{"subitem_description":"Citation:\nKounosu A, Sun S, Maeda Y, Dayi M, Yoshida A, Maruyama H, Hunt V, Sugimoto A, Kikuchi T. Syntenic relationship of chromosomes in Strongyloides species and Rhabditophanes diutinus based on the chromosome-level genome assemblies. Philos Trans R Soc Lond B Biol Sci. 2024 Jan 15;379(1894):20220446. doi: 10.1098/rstb.2022.0446","subitem_description_language":"en","subitem_description_type":"Other"}]},"item_10001_publisher_8":{"attribute_name":"出版者","attribute_value_mlt":[{"subitem_publisher":"The Royal Society","subitem_publisher_language":"en"}]},"item_10001_relation_14":{"attribute_name":"DOI","attribute_value_mlt":[{"subitem_relation_type":"isVersionOf","subitem_relation_type_id":{"subitem_relation_type_id_text":"https://doi.org/10.1098/rstb.2022.0446","subitem_relation_type_select":"DOI"}}]},"item_10001_source_id_9":{"attribute_name":"ISSN","attribute_value_mlt":[{"subitem_source_identifier":"0962-8436","subitem_source_identifier_type":"ISSN"},{"subitem_source_identifier":"1471-2970","subitem_source_identifier_type":"EISSN"}]},"item_10001_version_type_20":{"attribute_name":"著者版フラグ","attribute_value_mlt":[{"subitem_version_resource":"http://purl.org/coar/version/c_970fb48d4fbd8a85","subitem_version_type":"VoR"}]},"item_access_right":{"attribute_name":"アクセス権","attribute_value_mlt":[{"subitem_access_right":"open access","subitem_access_right_uri":"http://purl.org/coar/access_right/c_abf2"}]},"item_creator":{"attribute_name":"著者","attribute_type":"creator","attribute_value_mlt":[{"creatorNames":[{"creatorName":"Kounosu, Asuka","creatorNameLang":"en"}]},{"creatorNames":[{"creatorName":"Sun, Simo","creatorNameLang":"en"}]},{"creatorNames":[{"creatorName":"Maeda, Yasunobu","creatorNameLang":"en"}]},{"creatorNames":[{"creatorName":"Dayi, Mehmet","creatorNameLang":"en"}]},{"creatorNames":[{"creatorName":"Yoshida, Akemi","creatorNameLang":"en"}]},{"creatorAffiliations":[{"affiliationNameIdentifiers":[{"affiliationNameIdentifier":"0000000106573887","affiliationNameIdentifierScheme":"ISNI","affiliationNameIdentifierURI":"https://isni.org/isni/0000000106573887"}],"affiliationNames":[{"affiliationName":"宮崎大学","affiliationNameLang":"ja"},{"affiliationName":"University of Miyazaki","affiliationNameLang":"en"}]}],"creatorNames":[{"creatorName":"丸山, 治彦","creatorNameLang":"ja"},{"creatorName":"マルヤマ, ハルヒコ","creatorNameLang":"ja-Kana"},{"creatorName":"Maruyama, Haruhiko","creatorNameLang":"en"}],"familyNames":[{"familyName":"丸山","familyNameLang":"ja"},{"familyName":"マルヤマ","familyNameLang":"ja-Kana"},{"familyName":"Maruyama","familyNameLang":"en"}],"givenNames":[{"givenName":"治彦","givenNameLang":"ja"},{"givenName":"ハルヒコ","givenNameLang":"ja-Kana"},{"givenName":"Haruhiko","givenNameLang":"en"}],"nameIdentifiers":[{"nameIdentifier":"3231","nameIdentifierScheme":"WEKO"},{"nameIdentifier":"90229625","nameIdentifierScheme":"e-Rad_Researcher","nameIdentifierURI":"https://kaken.nii.ac.jp/ja/search/?qm=90229625"}]},{"creatorNames":[{"creatorName":"Hunt, Vicky","creatorNameLang":"en"}]},{"creatorNames":[{"creatorName":"Sugimoto, Asako","creatorNameLang":"en"}]},{"creatorNames":[{"creatorName":"Kikuchi, Taisei","creatorNameLang":"en"}]}]},"item_files":{"attribute_name":"ファイル情報","attribute_type":"file","attribute_value_mlt":[{"accessrole":"open_access","date":[{"dateType":"Available","dateValue":"2024-09-05"}],"filename":"Syntenic relationship of chromosomes in Strongyloides species and Rhabditophanes diutinus based on the chromosome-level genome assemblies.pdf","filesize":[{"value":"3.1 MB"}],"format":"application/pdf","licensetype":"license_0","mimetype":"application/pdf","url":{"label":"article","objectType":"fulltext","url":"https://miyazaki-u.repo.nii.ac.jp/record/2000731/files/Syntenic relationship of chromosomes in Strongyloides species and Rhabditophanes diutinus based on the chromosome-level genome assemblies.pdf"},"version_id":"b9cd3cf8-11ea-4e71-876f-9bab6747f0d8"}]},"item_keyword":{"attribute_name":"キーワード","attribute_value_mlt":[{"subitem_subject":"Strongyloides ratti","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"Hi-C","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"parthenogenesis","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"sex determination","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"sex chromosome evolution","subitem_subject_language":"en","subitem_subject_scheme":"Other"}]},"item_language":{"attribute_name":"言語","attribute_value_mlt":[{"subitem_language":"eng"}]},"item_resource_type":{"attribute_name":"資源タイプ","attribute_value_mlt":[{"resourcetype":"journal article","resourceuri":"http://purl.org/coar/resource_type/c_6501"}]},"item_title":"Syntenic relationship of chromosomes in Strongyloides species and Rhabditophanes diutinus based on the chromosome-level genome assemblies","item_titles":{"attribute_name":"タイトル","attribute_value_mlt":[{"subitem_title":"Syntenic relationship of chromosomes in Strongyloides species and Rhabditophanes diutinus based on the chromosome-level genome assemblies","subitem_title_language":"en"}]},"item_type_id":"10001","owner":"9","path":["76","64"],"pubdate":{"attribute_name":"PubDate","attribute_value":"2024-09-05"},"publish_date":"2024-09-05","publish_status":"0","recid":"2000731","relation_version_is_last":true,"title":["Syntenic relationship of chromosomes in Strongyloides species and Rhabditophanes diutinus based on the chromosome-level genome assemblies"],"weko_creator_id":"9","weko_shared_id":-1},"updated":"2024-12-26T07:06:57.665842+00:00"}